J3_9BDP_019

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAU*GCUUCUG*CAAGG

Length

15 nucleotides

Bulged bases

9BDP|1|A28S|U|4989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|C|4970
9BDP|1|A28S|A|4971
9BDP|1|A28S|U|4972
*
9BDP|1|A28S|G|4986
9BDP|1|A28S|C|4987
9BDP|1|A28S|U|4988
9BDP|1|A28S|U|4989
9BDP|1|A28S|C|4990
9BDP|1|A28S|U|4991
9BDP|1|A28S|G|4992
*
9BDP|1|A28S|C|5059
9BDP|1|A28S|A|5060
9BDP|1|A28S|A|5061
9BDP|1|A28S|G|5062
9BDP|1|A28S|G|5063

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL03

60S ribosomal protein L3

Chain AL17

60S ribosomal protein L17

Chain AL31

60S ribosomal protein L31