J3_9BDP_037

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAGAUG*CAGU*AGGGUGUAAAUC

Length

22 nucleotides

Bulged bases

9BDP|1|A28S|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|G|2550
9BDP|1|A28S|A|2551
9BDP|1|A28S|G|2552
9BDP|1|A28S|A|2553
9BDP|1|A28S|U|2554
9BDP|1|A28S|G|2555
*
9BDP|1|A28S|C|2572
9BDP|1|A28S|A|2573
9BDP|1|A28S|G|2574
9BDP|1|A28S|U|2575
*
9BDP|1|A28S|A|2757
9BDP|1|A28S|G|2758
9BDP|1|A28S|G|2759
9BDP|1|A28S|G|2760
9BDP|1|A28S|U|2761
9BDP|1|A28S|G|2762
9BDP|1|A28S|U|2763
9BDP|1|A28S|A|2764
9BDP|1|A28S|A|2765
9BDP|1|A28S|A|2766
9BDP|1|A28S|U|2767
9BDP|1|A28S|C|2768

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL27

60S ribosomal protein L27

Chain AL34

60S ribosomal protein L34