J3_9BKD_010
3D structure
- PDB id
- 9BKD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of human Pdcd4 bound to the 40S small ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9BKD|1|A|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BKD|1|A|C|1391
9BKD|1|A|U|1392
9BKD|1|A|G|1393
9BKD|1|A|G|1394
9BKD|1|A|C|1395
*
9BKD|1|A|G|1450
9BKD|1|A|G|1451
9BKD|1|A|A|1452
9BKD|1|A|C|1453
9BKD|1|A|A|1454
9BKD|1|A|A|1455
9BKD|1|A|G|1456
*
9BKD|1|A|C|1470
9BKD|1|A|C|1471
9BKD|1|A|C|1472
9BKD|1|A|G|1473
9BKD|1|A|A|1474
9BKD|1|A|G|1475
9BKD|1|A|A|1476
9BKD|1|A|U|1477
9BKD|1|A|U|1478
9BKD|1|A|G|1479
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain M
- 40S ribosomal protein S17
- Chain V
- 40S ribosomal protein S5
- Chain Y
- 40S ribosomal protein S16
- Chain Z
- Small ribosomal subunit protein uS3
- Chain c
- Receptor of activated protein C kinase 1
- Chain h
- 40S ribosomal protein S20
- Chain i
- 40S ribosomal protein S29
- Chain n
- 40S ribosomal protein S28
Coloring options: