J3_9BS0_015

3D structure

PDB id

9BS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

YphC-treated 45SYphC particle. Class 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGAUAG*CGC*GACG

Length

13 nucleotides

Bulged bases

9BS0|1|B|G|10, 9BS0|1|B|U|12, 9BS0|1|B|C|106

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BS0|1|B|C|9
9BS0|1|B|G|10
9BS0|1|B|A|11
9BS0|1|B|U|12
9BS0|1|B|A|13
9BS0|1|B|G|14
*
9BS0|1|B|C|66
9BS0|1|B|G|67
9BS0|1|B|C|68
*
9BS0|1|B|G|104
9BS0|1|B|A|105
9BS0|1|B|C|106
9BS0|1|B|G|107

Current chains

Chain B

5S rRNA

Nearby chains

Chain Q

Large ribosomal subunit protein bL27