J3_9BSS_011

3D structure

PDB id

9BSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

45SRbgA particle in complex with RbgA and YphC. Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCC*GGCUUAGUGAUC*GCUCAAC

Length

23 nucleotides

Bulged bases

9BSS|1|A|U|2419, 9BSS|1|A|A|2455

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BSS|1|A|G|2311
9BSS|1|A|C|2312
9BSS|1|A|C|2313
9BSS|1|A|C|2314
*
9BSS|1|A|G|2412
9BSS|1|A|G|2413
9BSS|1|A|C|2414
9BSS|1|A|U|2415
9BSS|1|A|U|2416
9BSS|1|A|A|2417
9BSS|1|A|G|2418
9BSS|1|A|U|2419
9BSS|1|A|G|2420
9BSS|1|A|A|2421
9BSS|1|A|U|2422
9BSS|1|A|C|2423
*
9BSS|1|A|G|2450
9BSS|1|A|C|2451
9BSS|1|A|U|2452
9BSS|1|A|C|2453
9BSS|1|A|A|2454
9BSS|1|A|A|2455
9BSS|1|A|C|2456

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

Large ribosomal subunit protein bL27

Chain W

GTPase Der