J3_9C8K_005
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACCACCAG*CCAGUAA*UGAUUAAGUCCCU
- Length
- 28 nucleotides
- Bulged bases
- 9C8K|1|1|C|1216, 9C8K|1|1|A|1679
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9C8K|1|1|A|1214
9C8K|1|1|C|1215
9C8K|1|1|C|1216
9C8K|1|1|A|1217
9C8K|1|1|C|1218
9C8K|1|1|C|1219
9C8K|1|1|A|1220
9C8K|1|1|G|1221
*
9C8K|1|1|C|1645
9C8K|1|1|C|1646
9C8K|1|1|A|1647
9C8K|1|1|G|1648
9C8K|1|1|U|1649
9C8K|1|1|A|1650
9C8K|1|1|A|1651
*
9C8K|1|1|U|1673
9C8K|1|1|G|1674
9C8K|1|1|A|1675
9C8K|1|1|U|1676
9C8K|1|1|U|1677
9C8K|1|1|A|1678
9C8K|1|1|A|1679
9C8K|1|1|G|1680
9C8K|1|1|U|1681
9C8K|1|1|C|1682
9C8K|1|1|C|1683
9C8K|1|1|C|1684
9C8K|1|1|U|1685
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain F
- uS7
- Chain Q
- uS9
- Chain a
- 40S ribosomal protein S26
- Chain c
- eS28
Coloring options: