J3_9C8K_008
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAG*CGAGACU*AGCA
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9C8K|1|1|U|1342
9C8K|1|1|U|1343
9C8K|1|1|A|1344
9C8K|1|1|G|1345
*
9C8K|1|1|C|1384
9C8K|1|1|G|1385
9C8K|1|1|A|1386
9C8K|1|1|G|1387
9C8K|1|1|A|1388
9C8K|1|1|C|1389
9C8K|1|1|U|1390
*
9C8K|1|1|A|1480
9C8K|1|1|G|1481
9C8K|1|1|C|1482
9C8K|1|1|A|1483
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain C
- 40S ribosomal protein uS5
- Chain D
- 40S ribosomal protein uS3
- Chain Q
- uS9
- Chain R
- Small ribosomal subunit protein eS17
- Chain U
- uS10
- Chain d
- uS14
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