3D structure

PDB id
9CN3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human 39S mitoribosome in complex with antibiotic Linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.62 Å

Loop

Sequence
CUAG*CAAUAGAUAUAGUAC*GGAAAG
Length
25 nucleotides
Bulged bases
9CN3|1|A|U|1774
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9CN3|1|A|C|1678
9CN3|1|A|U|1679
9CN3|1|A|A|1680
9CN3|1|A|G|1681
*
9CN3|1|A|C|1771
9CN3|1|A|A|1772
9CN3|1|A|A|1773
9CN3|1|A|U|1774
9CN3|1|A|A|1775
9CN3|1|A|G|1776
9CN3|1|A|A|1777
9CN3|1|A|U|1778
9CN3|1|A|A|1779
9CN3|1|A|U|1780
9CN3|1|A|A|1781
9CN3|1|A|G|1782
9CN3|1|A|U|1783
9CN3|1|A|A|1784
9CN3|1|A|C|1785
*
9CN3|1|A|G|1792
9CN3|1|A|G|1793
9CN3|1|A|A|1794
9CN3|1|A|A|1795
9CN3|1|A|A|1796
9CN3|1|A|G|1797

Current chains

Chain A
16S rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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