J3_9CN3_005
3D structure
- PDB id
- 9CN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 39S mitoribosome in complex with antibiotic Linezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- AAAAUUUAACACCCAUAG*CAAUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 63 nucleotides
- Bulged bases
- 9CN3|1|A|A|2154, 9CN3|1|A|U|2158, 9CN3|1|A|U|2159, 9CN3|1|A|A|2160, 9CN3|1|A|A|2223, 9CN3|1|A|C|2224, 9CN3|1|A|A|2228, 9CN3|1|A|A|2229, 9CN3|1|A|A|2230, 9CN3|1|A|U|2233, 9CN3|1|A|C|2234, 9CN3|1|A|A|2241, 9CN3|1|A|U|2242, 9CN3|1|A|A|2243, 9CN3|1|A|U|2244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9CN3|1|A|A|2153
9CN3|1|A|A|2154
9CN3|1|A|A|2155
9CN3|1|A|A|2156
9CN3|1|A|U|2157
9CN3|1|A|U|2158
9CN3|1|A|U|2159
9CN3|1|A|A|2160
9CN3|1|A|A|2161
9CN3|1|A|C|2162
9CN3|1|A|A|2163
9CN3|1|A|C|2164
9CN3|1|A|C|2165
9CN3|1|A|C|2166
9CN3|1|A|A|2167
9CN3|1|A|U|2168
9CN3|1|A|A|2169
9CN3|1|A|G|2170
*
9CN3|1|A|C|2190
9CN3|1|A|A|2191
9CN3|1|A|A|2192
9CN3|1|A|U|2193
9CN3|1|A|U|2194
9CN3|1|A|A|2195
9CN3|1|A|A|2196
9CN3|1|A|G|2197
*
9CN3|1|A|C|2212
9CN3|1|A|A|2213
9CN3|1|A|A|2214
9CN3|1|A|C|2215
9CN3|1|A|A|2216
9CN3|1|A|C|2217
9CN3|1|A|C|2218
9CN3|1|A|C|2219
9CN3|1|A|A|2220
9CN3|1|A|C|2221
9CN3|1|A|U|2222
9CN3|1|A|A|2223
9CN3|1|A|C|2224
9CN3|1|A|C|2225
9CN3|1|A|U|2226
9CN3|1|A|A|2227
9CN3|1|A|A|2228
9CN3|1|A|A|2229
9CN3|1|A|A|2230
9CN3|1|A|A|2231
9CN3|1|A|A|2232
9CN3|1|A|U|2233
9CN3|1|A|C|2234
9CN3|1|A|C|2235
9CN3|1|A|C|2236
9CN3|1|A|A|2237
9CN3|1|A|A|2238
9CN3|1|A|A|2239
9CN3|1|A|C|2240
9CN3|1|A|A|2241
9CN3|1|A|U|2242
9CN3|1|A|A|2243
9CN3|1|A|U|2244
9CN3|1|A|A|2245
9CN3|1|A|A|2246
9CN3|1|A|C|2247
9CN3|1|A|U|2248
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain K
- 39S ribosomal protein L13, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain j
- cDNA FLJ76418, highly similar to Homo sapiens mitochondrial ribosomal protein L52 (MRPL52), transcript variant 1, mRNA
- Chain k
- 39S ribosomal protein L53, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: