J3_9DUK_016
3D structure
- PDB id
- 9DUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of mutant 30S subunit with extended helix 26, version 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- UAU*AGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 9DUK|1|A|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9DUK_016 not in the Motif Atlas
- Homologous match to J3_5J7L_054
- Geometric discrepancy: 0.1694
- The information below is about J3_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
9DUK|1|A|U|1116
9DUK|1|A|A|1117
9DUK|1|A|U|1118
*
9DUK|1|A|A|1155
9DUK|1|A|G|1156
9DUK|1|A|A|1157
9DUK|1|A|C|1158
9DUK|1|A|U|1159
9DUK|1|A|G|1160
9DUK|1|A|C|1161
*
9DUK|1|A|G|1175
9DUK|1|A|A|1176
9DUK|1|A|G|1177
9DUK|1|A|G|1178
9DUK|1|A|A|1179
9DUK|1|A|A|1180
9DUK|1|A|G|1181
9DUK|1|A|G|1182
9DUK|1|A|U|1183
9DUK|1|A|G|1184
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- Small ribosomal subunit protein uS2
- Chain G
- 30S ribosomal protein S7
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
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