J3_9EC3_008
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- UGAUCUA*UAGGG*CAAUCAAA
- Length
- 20 nucleotides
- Bulged bases
- 9EC3|1|I|U|815, 9EC3|1|I|A|918, 9EC3|1|I|U|919, 9EC3|1|I|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EC3|1|I|U|812
9EC3|1|I|G|813
9EC3|1|I|A|814
9EC3|1|I|U|815
9EC3|1|I|C|816
9EC3|1|I|U|817
9EC3|1|I|A|818
*
9EC3|1|I|U|902
9EC3|1|I|A|903
9EC3|1|I|G|904
9EC3|1|I|G|905
9EC3|1|I|G|906
*
9EC3|1|I|C|916
9EC3|1|I|A|917
9EC3|1|I|A|918
9EC3|1|I|U|919
9EC3|1|I|C|920
9EC3|1|I|A|921
9EC3|1|I|A|922
9EC3|1|I|A|923
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 1
- DUF5302 domain-containing protein
- Chain 2
- 50S ribosomal protein bL34
- Chain C
- 50S ribosomal protein L2
- Chain E
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L22
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