J3_9EHO_005
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCAG*CAG*CCC
- Length
- 10 nucleotides
- Bulged bases
- 9EHO|1|5|C|996
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|G|843
9EHO|1|5|C|844
9EHO|1|5|A|845
9EHO|1|5|G|846
*
9EHO|1|5|C|938
9EHO|1|5|A|939
9EHO|1|5|G|940
*
9EHO|1|5|C|995
9EHO|1|5|C|996
9EHO|1|5|C|997
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein eL6
- Chain F
- 60S ribosomal protein L7 isoform X1
Coloring options: