J3_9EHO_007
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCGG*CGAAG*UCGGAA
- Length
- 15 nucleotides
- Bulged bases
- 9EHO|1|5|A|1466
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|U|1398
9EHO|1|5|C|1399
9EHO|1|5|G|1400
9EHO|1|5|G|1401
*
9EHO|1|5|C|1433
9EHO|1|5|G|1434
9EHO|1|5|A|1435
9EHO|1|5|A|1436
9EHO|1|5|G|1437
*
9EHO|1|5|U|1462
9EHO|1|5|C|1463
9EHO|1|5|G|1464
9EHO|1|5|G|1465
9EHO|1|5|A|1466
9EHO|1|5|A|1467
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- Large ribosomal subunit protein uL2
- Chain R
- Ribosomal protein L19
- Chain g
- Large ribosomal subunit protein eL34
- Chain p
- Large ribosomal subunit protein eL43
Coloring options: