J3_9EHO_017
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUUAU*ACC*GUG
- Length
- 12 nucleotides
- Bulged bases
- 9EHO|1|7|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|7|C|9
9EHO|1|7|C|10
9EHO|1|7|U|11
9EHO|1|7|U|12
9EHO|1|7|A|13
9EHO|1|7|U|14
*
9EHO|1|7|A|65
9EHO|1|7|C|66
9EHO|1|7|C|67
*
9EHO|1|7|G|108
9EHO|1|7|U|109
9EHO|1|7|G|110
Current chains
- Chain 7
- 5S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
- Chain I
- Large ribosomal subunit protein uL16
- Chain T
- 60S ribosomal protein L21
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