J3_9EHO_031
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGC*GGAC*GCG
- Length
- 11 nucleotides
- Bulged bases
- 9EHO|1|AA|C|2381
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|AA|C|2009
9EHO|1|AA|G|2010
9EHO|1|AA|G|2011
9EHO|1|AA|C|2012
*
9EHO|1|AA|G|2354
9EHO|1|AA|G|2355
9EHO|1|AA|A|2356
9EHO|1|AA|C|2357
*
9EHO|1|AA|G|2380
9EHO|1|AA|C|2381
9EHO|1|AA|G|2382
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain GG
- Ribosomal S5
- Chain RR
- 40S ribosomal protein S16
- Chain SS
- Small ribosomal subunit protein eS17
- Chain VV
- Small ribosomal subunit protein uS10
- Chain ee
- Small ribosomal subunit protein uS14
- Chain hh
- Small ribosomal subunit protein RACK1
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