J3_9F1B_002

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CAUUC*GGACCAGAG*CAUU(PSU)G

Length

20 nucleotides

Bulged bases

9F1B|1|A2|G|992

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|A2|C|938
9F1B|1|A2|A|939
9F1B|1|A2|U|940
9F1B|1|A2|U|941
9F1B|1|A2|C|942
*
9F1B|1|A2|G|986
9F1B|1|A2|G|987
9F1B|1|A2|A|988
9F1B|1|A2|C|989
9F1B|1|A2|C|990
9F1B|1|A2|A|991
9F1B|1|A2|G|992
9F1B|1|A2|A|993
9F1B|1|A2|G|994
*
9F1B|1|A2|C|1001
9F1B|1|A2|A|1002
9F1B|1|A2|U|1003
9F1B|1|A2|U|1004
9F1B|1|A2|PSU|1005
9F1B|1|A2|G|1006

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AE

Small ribosomal subunit protein eS26

Chain Aa

40S ribosomal protein S3a

Chain Am

40S ribosomal protein S13

Chain An

Small ribosomal subunit protein uS11

Chain Bp

60S ribosomal protein L37a