J3_9F1B_022

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CA(PSU)UCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

9F1B|1|B5|U|4728

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|B5|C|4709
9F1B|1|B5|A|4710
9F1B|1|B5|PSU|4711
9F1B|1|B5|U|4712
9F1B|1|B5|C|4713
9F1B|1|B5|G|4714
*
9F1B|1|B5|C|4722
9F1B|1|B5|C|4723
9F1B|1|B5|U|4724
9F1B|1|B5|G|4725
9F1B|1|B5|C|4726
9F1B|1|B5|U|4727
9F1B|1|B5|U|4728
9F1B|1|B5|C|4729
9F1B|1|B5|U|4730
*
9F1B|1|B5|A|4799
9F1B|1|B5|A|4800
9F1B|1|B5|G|4801
9F1B|1|B5|G|4802

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BP

Large ribosomal subunit protein uL22

Chain Bd

60S ribosomal protein L31