J3_9F1D_033
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- (OMC)UGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9F1D|1|A2|U|1478
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9F1D|1|A2|OMC|1392
9F1D|1|A2|U|1393
9F1D|1|A2|G|1394
9F1D|1|A2|G|1395
9F1D|1|A2|C|1396
*
9F1D|1|A2|G|1451
9F1D|1|A2|G|1452
9F1D|1|A2|A|1453
9F1D|1|A2|C|1454
9F1D|1|A2|A|1455
9F1D|1|A2|A|1456
9F1D|1|A2|G|1457
*
9F1D|1|A2|C|1471
9F1D|1|A2|C|1472
9F1D|1|A2|C|1473
9F1D|1|A2|G|1474
9F1D|1|A2|A|1475
9F1D|1|A2|G|1476
9F1D|1|A2|A|1477
9F1D|1|A2|U|1478
9F1D|1|A2|U|1479
9F1D|1|A2|G|1480
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein RACK1
- Chain AG
- 40S ribosomal protein S29
- Chain Ac
- 40S ribosomal protein S3
- Chain Ae
- Ribosomal protein S5
- Chain Ap
- Small ribosomal subunit protein uS9
- Chain Aq
- 40S ribosomal protein eS17
- Chain At
- 40S ribosomal protein uS10
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