J3_9FBV_006

3D structure

PDB id

9FBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Escherichia coli ribosome with P-site initiatior tRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAAG*UGUGC*GAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FBV|1|A|G|1003
9FBV|1|A|A|1004
9FBV|1|A|A|1005
9FBV|1|A|G|1006
*
9FBV|1|A|U|1023
9FBV|1|A|G|1024
9FBV|1|A|U|1025
9FBV|1|A|G|1026
9FBV|1|A|C|1027
*
9FBV|1|A|G|1034
9FBV|1|A|A|1035
9FBV|1|A|A|1036
9FBV|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14