J3_9FQZ_006

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

9FQZ|1|L5|C|704, 9FQZ|1|L5|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|C|451
9FQZ|1|L5|A|452
9FQZ|1|L5|G|453
9FQZ|1|L5|U|454
9FQZ|1|L5|C|455
*
9FQZ|1|L5|G|701
9FQZ|1|L5|U|702
9FQZ|1|L5|G|703
9FQZ|1|L5|C|704
9FQZ|1|L5|G|705
*
9FQZ|1|L5|C|1292
9FQZ|1|L5|G|1293
9FQZ|1|L5|A|1294
9FQZ|1|L5|C|1295
9FQZ|1|L5|G|1296

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a