J3_9FQZ_022

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

UAUC*GUU*ACUAAUA

Length

14 nucleotides

Bulged bases

9FQZ|1|L5|A|4464, 9FQZ|1|L5|U|4465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|U|4463
9FQZ|1|L5|A|4464
9FQZ|1|L5|U|4465
9FQZ|1|L5|C|4466
*
9FQZ|1|L5|G|4491
9FQZ|1|L5|U|4492
9FQZ|1|L5|U|4493
*
9FQZ|1|L5|A|4507
9FQZ|1|L5|C|4508
9FQZ|1|L5|U|4509
9FQZ|1|L5|A|4510
9FQZ|1|L5|A|4511
9FQZ|1|L5|U|4512
9FQZ|1|L5|A|4513

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23