J3_9FQZ_032

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CCG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

9FQZ|1|S2|C|1138, 9FQZ|1|S2|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|S2|C|1094
9FQZ|1|S2|C|1095
9FQZ|1|S2|G|1096
*
9FQZ|1|S2|U|1136
9FQZ|1|S2|U|1137
9FQZ|1|S2|C|1138
9FQZ|1|S2|C|1139
9FQZ|1|S2|G|1140
*
9FQZ|1|S2|C|1147
9FQZ|1|S2|A|1148
9FQZ|1|S2|A|1149
9FQZ|1|S2|A|1150
9FQZ|1|S2|G|1151

Current chains

Chain S2

SSU rRNA

Nearby chains

Chain SA

40S ribosomal protein SA

Chain SV

40S ribosomal protein S21

Chain SW

40S ribosomal protein S15a

Chain Sa

40S ribosomal protein S26

Chain Sb

40S ribosomal protein S27