J3_9FRA_014
3D structure
- PDB id
- 9FRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAC*GGACUGC*GAGGAGGGAG
- Length
- 20 nucleotides
- Bulged bases
- 9FRA|1|2|A|1146
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9FRA|1|2|C|1073
9FRA|1|2|A|1074
9FRA|1|2|C|1075
*
9FRA|1|2|G|1119
9FRA|1|2|G|1120
9FRA|1|2|A|1121
9FRA|1|2|C|1122
9FRA|1|2|U|1123
9FRA|1|2|G|1124
9FRA|1|2|C|1125
*
9FRA|1|2|G|1138
9FRA|1|2|A|1139
9FRA|1|2|G|1140
9FRA|1|2|G|1141
9FRA|1|2|A|1142
9FRA|1|2|G|1143
9FRA|1|2|G|1144
9FRA|1|2|G|1145
9FRA|1|2|A|1146
9FRA|1|2|G|1147
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain H
- Small ribosomal subunit protein uS7
- Chain K
- Small ribosomal subunit protein uS9
- Chain L
- Small ribosomal subunit protein uS10
- Chain P
- Small ribosomal subunit protein uS14
- Chain S
- Small ribosomal subunit protein eS17
- Chain X
- Small ribosomal subunit protein eS28
- Chain d
- VapB-type antitoxin
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