J3_9FRK_011
3D structure
- PDB id
- 9FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGCCAG*CGAGAC*GCCACG
- Length
- 18 nucleotides
- Bulged bases
- 9FRK|1|2|C|1022
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9FRK|1|2|C|1020
9FRK|1|2|G|1021
9FRK|1|2|C|1022
9FRK|1|2|C|1023
9FRK|1|2|A|1024
9FRK|1|2|G|1025
*
9FRK|1|2|C|1064
9FRK|1|2|G|1065
9FRK|1|2|A|1066
9FRK|1|2|G|1067
9FRK|1|2|A|1068
9FRK|1|2|C|1069
*
9FRK|1|2|G|1151
9FRK|1|2|C|1152
9FRK|1|2|C|1153
9FRK|1|2|A|1154
9FRK|1|2|C|1155
9FRK|1|2|G|1156
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain F
- Small ribosomal subunit protein uS5
- Chain K
- Small ribosomal subunit protein uS9
- Chain L
- Small ribosomal subunit protein uS10
- Chain P
- Small ribosomal subunit protein uS14
- Chain S
- Small ribosomal subunit protein eS17
- Chain Z
- Small ribosomal subunit protein uS3
- Chain a
- aS34
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