J3_9FRL_008
3D structure
- PDB id
- 9FRL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA with h44 in up position
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9FRL|1|2|U|907
9FRL|1|2|G|908
9FRL|1|2|G|909
9FRL|1|2|A|910
*
9FRL|1|2|U|1198
9FRL|1|2|A|1199
9FRL|1|2|C|1200
*
9FRL|1|2|G|1301
9FRL|1|2|G|1302
9FRL|1|2|A|1303
9FRL|1|2|A|1304
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain H
- Small ribosomal subunit protein uS7
- Chain K
- Small ribosomal subunit protein uS9
- Chain O
- Small ribosomal subunit protein uS13
- Chain U
- Small ribosomal subunit protein eS19
Coloring options: