J3_9G1Z_002
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAAUUUGAAAU*AGUUGUAAUUUGAAG*CGACG
- Length
- 32 nucleotides
- Bulged bases
- 9G1Z|1|1|U|116, 9G1Z|1|1|G|119, 9G1Z|1|1|A|120, 9G1Z|1|1|U|146, 9G1Z|1|1|A|155
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9G1Z|1|1|C|112
9G1Z|1|1|A|113
9G1Z|1|1|A|114
9G1Z|1|1|A|115
9G1Z|1|1|U|116
9G1Z|1|1|U|117
9G1Z|1|1|U|118
9G1Z|1|1|G|119
9G1Z|1|1|A|120
9G1Z|1|1|A|121
9G1Z|1|1|A|122
9G1Z|1|1|U|123
*
9G1Z|1|1|A|143
9G1Z|1|1|G|144
9G1Z|1|1|U|145
9G1Z|1|1|U|146
9G1Z|1|1|G|147
9G1Z|1|1|U|148
9G1Z|1|1|A|149
9G1Z|1|1|A|150
9G1Z|1|1|U|151
9G1Z|1|1|U|152
9G1Z|1|1|U|153
9G1Z|1|1|G|154
9G1Z|1|1|A|155
9G1Z|1|1|A|156
9G1Z|1|1|G|157
*
9G1Z|1|1|C|263
9G1Z|1|1|G|264
9G1Z|1|1|A|265
9G1Z|1|1|C|266
9G1Z|1|1|G|267
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain AJ
- 60S ribosomal protein L36
- Chain p
- 60S ribosomal protein L8
- Chain t
- 60S ribosomal protein L13
- Chain v
- Ribosomal protein L15
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