J3_9G1Z_010
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAG*CGUAG*UCGA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9G1Z_010 not in the Motif Atlas
- Homologous match to J3_8CRE_010
- Geometric discrepancy: 0.0728
- The information below is about J3_8CRE_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.7
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
9G1Z|1|1|U|825
9G1Z|1|1|A|826
9G1Z|1|1|G|827
*
9G1Z|1|1|C|859
9G1Z|1|1|G|860
9G1Z|1|1|U|861
9G1Z|1|1|A|862
9G1Z|1|1|G|863
*
9G1Z|1|1|U|888
9G1Z|1|1|C|889
9G1Z|1|1|G|890
9G1Z|1|1|A|891
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AH
- Large ribosomal subunit protein eL34
- Chain AQ
- Ribosomal 60S subunit protein L43A
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain z
- Ribosomal protein L19
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