J3_9G1Z_024
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAGAUG*CAUAGCAGG*CGGAUAGCAAUGUCA
- Length
- 30 nucleotides
- Bulged bases
- 9G1Z|1|1|A|3142, 9G1Z|1|1|G|3143, 9G1Z|1|1|A|3180, 9G1Z|1|1|G|3181, 9G1Z|1|1|G|3184, 9G1Z|1|1|A|3233, 9G1Z|1|1|A|3235, 9G1Z|1|1|C|3237
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9G1Z|1|1|U|3141
9G1Z|1|1|A|3142
9G1Z|1|1|G|3143
9G1Z|1|1|A|3144
9G1Z|1|1|U|3145
9G1Z|1|1|G|3146
*
9G1Z|1|1|C|3177
9G1Z|1|1|A|3178
9G1Z|1|1|U|3179
9G1Z|1|1|A|3180
9G1Z|1|1|G|3181
9G1Z|1|1|C|3182
9G1Z|1|1|A|3183
9G1Z|1|1|G|3184
9G1Z|1|1|G|3185
*
9G1Z|1|1|C|3230
9G1Z|1|1|G|3231
9G1Z|1|1|G|3232
9G1Z|1|1|A|3233
9G1Z|1|1|U|3234
9G1Z|1|1|A|3235
9G1Z|1|1|G|3236
9G1Z|1|1|C|3237
9G1Z|1|1|A|3238
9G1Z|1|1|A|3239
9G1Z|1|1|U|3240
9G1Z|1|1|G|3241
9G1Z|1|1|U|3242
9G1Z|1|1|C|3243
9G1Z|1|1|A|3244
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AG
- Ribosomal 60S subunit protein L33A
- Chain n
- 60S ribosomal protein L6
- Chain u
- Ribosomal 60S subunit protein L14B
- Chain w
- Ribosomal 60S subunit protein L16A
- Chain x
- Ribosomal 60S subunit protein L17B
Coloring options: