J3_9G1Z_039
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UG*UGUC*GAUAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9G1Z_039 not in the Motif Atlas
- Homologous match to J3_8CRE_083
- Geometric discrepancy: 0.0686
- The information below is about J3_8CRE_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76043.4
- Basepair signature
- cWW-cWW-tSS-F-F-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
9G1Z|1|A|U|1278
9G1Z|1|A|G|1279
*
9G1Z|1|A|U|1288
9G1Z|1|A|G|1289
9G1Z|1|A|U|1290
9G1Z|1|A|C|1291
*
9G1Z|1|A|G|1303
9G1Z|1|A|A|1304
9G1Z|1|A|U|1305
9G1Z|1|A|A|1306
9G1Z|1|A|A|1307
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein S0
- Chain D
- Ribosomal 40S subunit protein S2
- Chain S
- Ribosomal 40S subunit protein S17B
Coloring options: