J3_9GGR_012

3D structure

PDB id

9GGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGU*AAUGUGC*GGAAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GGR|1|0|G|1003
9GGR|1|0|A|1004
9GGR|1|0|A|1005
9GGR|1|0|G|1006
9GGR|1|0|U|1007
*
9GGR|1|0|A|1021
9GGR|1|0|A|1022
9GGR|1|0|U|1023
9GGR|1|0|G|1024
9GGR|1|0|U|1025
9GGR|1|0|G|1026
9GGR|1|0|C|1027
*
9GGR|1|0|G|1033
9GGR|1|0|G|1034
9GGR|1|0|A|1035
9GGR|1|0|A|1036
9GGR|1|0|C|1037

Current chains

Chain 0

16S ribosomal RNA

Nearby chains

Chain B

ATP-dependent RNA helicase HrpA

Chain G

Small ribosomal subunit protein uS14