J3_9GGR_041

3D structure

PDB id

9GGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

9GGR|1|AV|U|1082, 9GGR|1|AV|U|1083, 9GGR|1|AV|A|1084

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GGR|1|AV|G|1055
9GGR|1|AV|G|1056
9GGR|1|AV|A|1057
*
9GGR|1|AV|U|1081
9GGR|1|AV|U|1082
9GGR|1|AV|U|1083
9GGR|1|AV|A|1084
9GGR|1|AV|A|1085
9GGR|1|AV|A|1086
9GGR|1|AV|G|1087
*
9GGR|1|AV|C|1102
9GGR|1|AV|A|1103
9GGR|1|AV|C|1104

Current chains

Chain AV

23S ribosomal RNA

Nearby chains

Chain Ad

50S ribosomal protein L11

Chain Az

Large ribosomal subunit protein bL36A