J3_9GHF_012

3D structure

PDB id

9GHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAAG*UGUGC*GAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHF|1|A|G|1003
9GHF|1|A|A|1004
9GHF|1|A|A|1005
9GHF|1|A|G|1006
*
9GHF|1|A|U|1023
9GHF|1|A|G|1024
9GHF|1|A|U|1025
9GHF|1|A|G|1026
9GHF|1|A|C|1027
*
9GHF|1|A|G|1034
9GHF|1|A|A|1035
9GHF|1|A|A|1036
9GHF|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14