J3_9GHG_030
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- CUUG*CAG*CUUAUG
- Length
- 13 nucleotides
- Bulged bases
- 9GHG|1|a|U|1224
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GHG_030 not in the Motif Atlas
- Homologous match to J3_5J7L_007
- Geometric discrepancy: 0.1137
- The information below is about J3_5J7L_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82572.1
- Basepair signature
- cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
9GHG|1|a|C|999
9GHG|1|a|U|1000
9GHG|1|a|U|1001
9GHG|1|a|G|1002
*
9GHG|1|a|C|1056
9GHG|1|a|A|1057
9GHG|1|a|G|1058
*
9GHG|1|a|C|1220
9GHG|1|a|U|1221
9GHG|1|a|U|1222
9GHG|1|a|A|1223
9GHG|1|a|U|1224
9GHG|1|a|G|1225
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain C
- Far1
- Chain o
- 30S ribosomal protein S14 type Z
Coloring options: