J3_9GR1_024
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GR1_024 not in the Motif Atlas
- Homologous match to J3_5J7L_039
- Geometric discrepancy: 0.0413
- The information below is about J3_5J7L_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.7
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
9GR1|1|a|C|700
9GR1|1|a|A|701
9GR1|1|a|G|702
*
9GR1|1|a|C|734
9GR1|1|a|G|735
9GR1|1|a|A|736
9GR1|1|a|A|737
9GR1|1|a|C|738
*
9GR1|1|a|G|762
9GR1|1|a|A|763
9GR1|1|a|U|764
9GR1|1|a|G|765
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: