J3_9GUL_005

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

9GUL|1|L5|C|704, 9GUL|1|L5|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|C|451
9GUL|1|L5|A|452
9GUL|1|L5|G|453
9GUL|1|L5|U|454
9GUL|1|L5|C|455
*
9GUL|1|L5|G|701
9GUL|1|L5|U|702
9GUL|1|L5|G|703
9GUL|1|L5|C|704
9GUL|1|L5|G|705
*
9GUL|1|L5|C|1292
9GUL|1|L5|G|1293
9GUL|1|L5|A|1294
9GUL|1|L5|C|1295
9GUL|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a