J3_9GUL_007

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UGA(A2M)CUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

9GUL|1|L5|A2M|1534, 9GUL|1|L5|G|1641, 9GUL|1|L5|A|1642

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|U|1531
9GUL|1|L5|G|1532
9GUL|1|L5|A|1533
9GUL|1|L5|A2M|1534
9GUL|1|L5|C|1535
9GUL|1|L5|U|1536
9GUL|1|L5|A|1537
*
9GUL|1|L5|U|1622
9GUL|1|L5|A|1623
9GUL|1|L5|G|1624
*
9GUL|1|L5|C|1640
9GUL|1|L5|G|1641
9GUL|1|L5|A|1642
9GUL|1|L5|A|1643

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LN

60S ribosomal protein L15

Chain Lj

60S ribosomal protein L37

Chain Ll

60S ribosomal protein L39