J3_9GUU_011

3D structure

PDB id

9GUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (consensus)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

9GUU|1|A|U|1212, 9GUU|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9GUU_011 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.116

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

9GUU|1|A|C|990
9GUU|1|A|U|991
9GUU|1|A|U|992
9GUU|1|A|G|993
9GUU|1|A|A|994
9GUU|1|A|C|995
9GUU|1|A|A|996
9GUU|1|A|U|997
*
9GUU|1|A|A|1044
9GUU|1|A|C|1045
9GUU|1|A|A|1046
9GUU|1|A|G|1047
*
9GUU|1|A|C|1210
9GUU|1|A|U|1211
9GUU|1|A|U|1212
9GUU|1|A|A|1213
9GUU|1|A|C|1214
9GUU|1|A|G|1215

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain O

30S ribosomal protein S14