J3_9H3N_010

3D structure

PDB id

9H3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

CAUCCUG*CAAGGGUA*UUUAAAG

Length

22 nucleotides

Bulged bases

9H3N|1|A|A|2518, 9H3N|1|A|A|2564

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3N|1|A|C|2517
9H3N|1|A|A|2518
9H3N|1|A|U|2519
9H3N|1|A|C|2520
9H3N|1|A|C|2521
9H3N|1|A|U|2522
9H3N|1|A|G|2523
*
9H3N|1|A|C|2540
9H3N|1|A|A|2541
9H3N|1|A|A|2542
9H3N|1|A|G|2543
9H3N|1|A|G|2544
9H3N|1|A|G|2545
9H3N|1|A|U|2546
9H3N|1|A|A|2547
*
9H3N|1|A|U|2561
9H3N|1|A|U|2562
9H3N|1|A|U|2563
9H3N|1|A|A|2564
9H3N|1|A|A|2565
9H3N|1|A|A|2566
9H3N|1|A|G|2567

Current chains

Chain A

23S ribosomal RNA

Nearby chains