J3_9H3V_012
3D structure
- PDB id
- 9H3V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit precursor C-CP_L2-L28
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GGCAUAAGCCAGCUUGAC*GGU*AGGUC
- Length
- 26 nucleotides
- Bulged bases
- 9H3V|1|A|A|2333, 9H3V|1|A|U|2334, 9H3V|1|A|G|2382
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H3V|1|A|G|2330
9H3V|1|A|G|2331
9H3V|1|A|C|2332
9H3V|1|A|A|2333
9H3V|1|A|U|2334
9H3V|1|A|A|2335
9H3V|1|A|A|2336
9H3V|1|A|G|2337
9H3V|1|A|C|2338
9H3V|1|A|C|2339
9H3V|1|A|A|2340
9H3V|1|A|G|2341
9H3V|1|A|C|2342
9H3V|1|A|U|2343
9H3V|1|A|U|2344
9H3V|1|A|G|2345
9H3V|1|A|A|2346
9H3V|1|A|C|2347
*
9H3V|1|A|G|2370
9H3V|1|A|G|2371
9H3V|1|A|U|2372
*
9H3V|1|A|A|2381
9H3V|1|A|G|2382
9H3V|1|A|G|2383
9H3V|1|A|U|2384
9H3V|1|A|C|2385
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- Large ribosomal subunit protein uL5
- Chain O
- Large ribosomal subunit protein uL18
- Chain W
- Large ribosomal subunit protein bL27
Coloring options: