J3_9H4N_031
3D structure
- PDB id
- 9H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPL13 (eL13)-mutant 80S ribosome from mouse
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 9H4N|1|m2|G|993
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H4N|1|m2|A|940
9H4N|1|m2|U|941
9H4N|1|m2|U|942
9H4N|1|m2|C|943
*
9H4N|1|m2|G|987
9H4N|1|m2|G|988
9H4N|1|m2|A|989
9H4N|1|m2|C|990
9H4N|1|m2|C|991
9H4N|1|m2|A|992
9H4N|1|m2|G|993
9H4N|1|m2|A|994
9H4N|1|m2|G|995
*
9H4N|1|m2|C|1002
9H4N|1|m2|A|1003
9H4N|1|m2|U|1004
9H4N|1|m2|U|1005
9H4N|1|m2|U|1006
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain F3
- Small ribosomal subunit protein eS26
- Chain N3
- Small ribosomal subunit protein uS15
- Chain O3
- Small ribosomal subunit protein uS11
- Chain j2
- Large ribosomal subunit protein eL43
- Chain p2
- Small ribosomal subunit protein eS1
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