J3_9H4N_032
3D structure
- PDB id
- 9H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPL13 (eL13)-mutant 80S ribosome from mouse
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- CUGG*CUUCCG*CAAAG
- Length
- 15 nucleotides
- Bulged bases
- 9H4N|1|m2|C|1140, 9H4N|1|m2|A|1152
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H4N|1|m2|C|1096
9H4N|1|m2|U|1097
9H4N|1|m2|G|1098
9H4N|1|m2|G|1099
*
9H4N|1|m2|C|1137
9H4N|1|m2|U|1138
9H4N|1|m2|U|1139
9H4N|1|m2|C|1140
9H4N|1|m2|C|1141
9H4N|1|m2|G|1142
*
9H4N|1|m2|C|1149
9H4N|1|m2|A|1150
9H4N|1|m2|A|1151
9H4N|1|m2|A|1152
9H4N|1|m2|G|1153
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain D3
- Small ribosomal subunit protein eS21
- Chain F3
- Small ribosomal subunit protein eS26
- Chain P3
- Small ribosomal subunit protein uS8
- Chain S3
- Small ribosomal subunit protein eS27-like
- Chain o2
- Small ribosomal subunit protein uS2
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