J3_9H4N_033
3D structure
- PDB id
- 9H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPL13 (eL13)-mutant 80S ribosome from mouse
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- CCAG*CCAGUAA*UGAUUAAG
- Length
- 19 nucleotides
- Bulged bases
- 9H4N|1|m2|A|1681
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H4N|1|m2|C|1220
9H4N|1|m2|C|1221
9H4N|1|m2|A|1222
9H4N|1|m2|G|1223
*
9H4N|1|m2|C|1647
9H4N|1|m2|C|1648
9H4N|1|m2|A|1649
9H4N|1|m2|G|1650
9H4N|1|m2|U|1651
9H4N|1|m2|A|1652
9H4N|1|m2|A|1653
*
9H4N|1|m2|U|1675
9H4N|1|m2|G|1676
9H4N|1|m2|A|1677
9H4N|1|m2|U|1678
9H4N|1|m2|U|1679
9H4N|1|m2|A|1680
9H4N|1|m2|A|1681
9H4N|1|m2|G|1682
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain G3
- 40S ribosomal protein S28
- Chain s2
- 40S ribosomal protein S5
- Chain y2
- Small ribosomal subunit protein uS9
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