J3_9H4N_039
3D structure
- PDB id
- 9H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPL13 (eL13)-mutant 80S ribosome from mouse
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9H4N|1|m2|U|1479
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H4N|1|m2|C|1393
9H4N|1|m2|U|1394
9H4N|1|m2|G|1395
9H4N|1|m2|G|1396
9H4N|1|m2|C|1397
*
9H4N|1|m2|G|1452
9H4N|1|m2|G|1453
9H4N|1|m2|A|1454
9H4N|1|m2|C|1455
9H4N|1|m2|A|1456
9H4N|1|m2|A|1457
9H4N|1|m2|G|1458
*
9H4N|1|m2|C|1472
9H4N|1|m2|C|1473
9H4N|1|m2|C|1474
9H4N|1|m2|G|1475
9H4N|1|m2|A|1476
9H4N|1|m2|G|1477
9H4N|1|m2|A|1478
9H4N|1|m2|U|1479
9H4N|1|m2|U|1480
9H4N|1|m2|G|1481
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain C3
- 40S ribosomal protein S20
- Chain H3
- Small ribosomal subunit protein uS14
- Chain I3
- Receptor of activated protein C kinase 1
- Chain q2
- Small ribosomal subunit protein uS3
- Chain s2
- 40S ribosomal protein S5
- Chain y2
- Small ribosomal subunit protein uS9
- Chain z2
- 40S ribosomal protein S17
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