J3_9H55_003

3D structure

PDB id

9H55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CU*AAUAGAC*GG

Length

11 nucleotides

Bulged bases

9H55|1|A|A|1019

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H55|1|A|C|973
9H55|1|A|U|974
*
9H55|1|A|A|1014
9H55|1|A|A|1015
9H55|1|A|U|1016
9H55|1|A|A|1017
9H55|1|A|G|1018
9H55|1|A|A|1019
9H55|1|A|C|1020
*
9H55|1|A|G|1030
9H55|1|A|G|1031

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain E

28S ribosomal protein S6, mitochondrial

Chain I

28S ribosomal protein S11, mitochondrial

Chain P

28S ribosomal protein S18c, mitochondrial

Chain Q

Small ribosomal subunit protein bS21m