J3_9H55_006

3D structure

PDB id

9H55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

9H55|1|A|U|1229, 9H55|1|A|C|1230, 9H55|1|A|A|1232

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H55|1|A|U|1210
9H55|1|A|G|1211
9H55|1|A|U|1212
9H55|1|A|A|1213
9H55|1|A|A|1214
9H55|1|A|U|1215
9H55|1|A|C|1216
*
9H55|1|A|G|1227
9H55|1|A|A|1228
9H55|1|A|U|1229
9H55|1|A|C|1230
9H55|1|A|A|1231
9H55|1|A|A|1232
9H55|1|A|C|1233
9H55|1|A|C|1234
9H55|1|A|U|1235
9H55|1|A|C|1236
9H55|1|A|A|1237
9H55|1|A|C|1238
*
9H55|1|A|G|1351
9H55|1|A|C|1352
9H55|1|A|A|1353
9H55|1|A|A|1354

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain H

28S ribosomal protein S10, mitochondrial

Chain K

28S ribosomal protein S14, mitochondrial