J3_9H55_008

3D structure

PDB id

9H55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAUUU*AAACUAC*GGUG

Length

16 nucleotides

Bulged bases

9H55|1|A|U|1369, 9H55|1|A|C|1385, 9H55|1|A|U|1386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H55|1|A|C|1366
9H55|1|A|A|1367
9H55|1|A|U|1368
9H55|1|A|U|1369
9H55|1|A|U|1370
*
9H55|1|A|A|1382
9H55|1|A|A|1383
9H55|1|A|A|1384
9H55|1|A|C|1385
9H55|1|A|U|1386
9H55|1|A|A|1387
9H55|1|A|C|1388
*
9H55|1|A|G|1418
9H55|1|A|G|1419
9H55|1|A|U|1420
9H55|1|A|G|1421

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain F

28S ribosomal protein S7, mitochondrial

Chain X

28S ribosomal protein S29, mitochondrial