J3_9HFN_003

3D structure

PDB id

9HFN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUC*GCAGUAA*UGAACAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFN|1|A|C|1192
9HFN|1|A|U|1193
9HFN|1|A|C|1194
*
9HFN|1|A|G|1428
9HFN|1|A|C|1429
9HFN|1|A|A|1430
9HFN|1|A|G|1431
9HFN|1|A|U|1432
9HFN|1|A|A|1433
9HFN|1|A|A|1434
*
9HFN|1|A|U|1456
9HFN|1|A|G|1457
9HFN|1|A|A|1458
9HFN|1|A|A|1459
9HFN|1|A|C|1460
9HFN|1|A|A|1461
9HFN|1|A|G|1462

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Small ribosomal subunit protein mS37

Chain F

28S ribosomal protein S7, mitochondrial

Chain G

28S ribosomal protein S9, mitochondrial