J3_9HFO_001

3D structure

PDB id

9HFO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFO|1|A|C|677
9HFO|1|A|U|678
9HFO|1|A|C|679
9HFO|1|A|U|680
*
9HFO|1|A|A|866
9HFO|1|A|C|867
9HFO|1|A|C|868
9HFO|1|A|C|869
9HFO|1|A|C|870
9HFO|1|A|A|871
9HFO|1|A|G|872
*
9HFO|1|A|C|917
9HFO|1|A|A|918
9HFO|1|A|A|919
9HFO|1|A|G|920

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Translation initiation factor IF-2, mitochondrial

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial