J3_9HFO_004

3D structure

PDB id

9HFO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUC*GCAGUAA*UGAACAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFO|1|A|C|1192
9HFO|1|A|U|1193
9HFO|1|A|C|1194
*
9HFO|1|A|G|1428
9HFO|1|A|C|1429
9HFO|1|A|A|1430
9HFO|1|A|G|1431
9HFO|1|A|U|1432
9HFO|1|A|A|1433
9HFO|1|A|A|1434
*
9HFO|1|A|U|1456
9HFO|1|A|G|1457
9HFO|1|A|A|1458
9HFO|1|A|A|1459
9HFO|1|A|C|1460
9HFO|1|A|A|1461
9HFO|1|A|G|1462

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Small ribosomal subunit protein mS37

Chain F

28S ribosomal protein S7, mitochondrial

Chain G

28S ribosomal protein S9, mitochondrial