J3_9HMW_018
3D structure
- PDB id
- 9HMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- GUC*GAUAG*CGAAC
- Length
- 13 nucleotides
- Bulged bases
- 9HMW|1|A|A|1566, 9HMW|1|A|A|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HMW|1|A|G|1547
9HMW|1|A|U|1548
9HMW|1|A|C|1549
*
9HMW|1|A|G|1565
9HMW|1|A|A|1566
9HMW|1|A|U|1567
9HMW|1|A|A|1568
9HMW|1|A|G|1569
*
9HMW|1|A|C|1579
9HMW|1|A|G|1580
9HMW|1|A|A|1581
9HMW|1|A|A|1582
9HMW|1|A|C|1583
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AY
- Large ribosomal subunit protein eL37z
- Chain BG
- Large ribosomal subunit protein eL8y
- Chain BN
- Large ribosomal subunit protein uL23y
- Chain BQ
- Large ribosomal subunit protein uL2z
- Chain Ea
- Large ribosomal subunit protein eL15z
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